Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nphp4P59240 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Gm26361-201ENSMUST00000158868 186 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nphp4P59240 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC17.42■□□□□ 0.38
Nphp4P59240 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 Gm18041-201ENSMUST00000218210 618 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 AC166344.1-202ENSMUST00000224139 234 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.42■□□□□ 0.38
Nphp4P59240 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nphp4P59240 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nphp4P59240 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Nphp4P59240 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Retreg1-206ENSMUST00000228306 1430 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm13996-201ENSMUST00000118456 430 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm18212-201ENSMUST00000211678 889 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.41■□□□□ 0.38
Nphp4P59240 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nphp4P59240 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nphp4P59240 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC17.4■□□□□ 0.38
Nphp4P59240 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.4■□□□□ 0.38
Nphp4P59240 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.4■□□□□ 0.38
Nphp4P59240 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.4■□□□□ 0.38
Nphp4P59240 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.4■□□□□ 0.38
Nphp4P59240 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nphp4P59240 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nphp4P59240 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nphp4P59240 Gm24231-201ENSMUST00000104315 133 ntBASIC17.39■□□□□ 0.38
Nphp4P59240 Gm14760-201ENSMUST00000121831 999 ntBASIC17.39■□□□□ 0.38
Nphp4P59240 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nphp4P59240 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC17.39■□□□□ 0.38
Nphp4P59240 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Nphp4P59240 Gm37666-201ENSMUST00000194110 866 ntBASIC17.39■□□□□ 0.38
Nphp4P59240 Gm45598-202ENSMUST00000210719 986 ntBASIC17.39■□□□□ 0.38
Nphp4P59240 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC17.39■□□□□ 0.38
Nphp4P59240 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nphp4P59240 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Nphp4P59240 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nphp4P59240 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nphp4P59240 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.39■□□□□ 0.37
Nphp4P59240 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms