Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Vps33bP59016 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps33bP59016 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps33bP59016 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Vps33bP59016 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps33bP59016 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC16.2■□□□□ 0.18
Vps33bP59016 Gm11675-201ENSMUST00000121873 832 ntBASIC16.2■□□□□ 0.18
Vps33bP59016 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.2■□□□□ 0.18
Vps33bP59016 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps33bP59016 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Gm10774-201ENSMUST00000188689 204 ntBASIC16.2■□□□□ 0.18
Vps33bP59016 Gm18974-201ENSMUST00000221478 1031 ntBASIC16.2■□□□□ 0.18
Vps33bP59016 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps33bP59016 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps33bP59016 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.2■□□□□ 0.18
Vps33bP59016 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Vps33bP59016 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm14724-201ENSMUST00000118400 537 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Mir1901-201ENSMUST00000122616 78 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm23153-201ENSMUST00000175323 313 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm18304-201ENSMUST00000189162 546 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm18893-201ENSMUST00000198416 943 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps33bP59016 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm9463-201ENSMUST00000206707 601 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps33bP59016 AC099645.1-201ENSMUST00000226476 1105 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps33bP59016 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.19■□□□□ 0.18
Vps33bP59016 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps33bP59016 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Vps33bP59016 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Rmrp-201ENSMUST00000157463 271 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vps33bP59016 Gm37905-201ENSMUST00000195310 341 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Mir7686-201ENSMUST00000200604 57 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 AC122408.1-201ENSMUST00000218949 218 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.18■□□□□ 0.18
Vps33bP59016 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Vps33bP59016 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps33bP59016 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms