Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.29□□□□□ -0.28
Tubgcp3P58854 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubgcp3P58854 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.28□□□□□ -0.28
Tubgcp3P58854 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gm8463-201ENSMUST00000208573 613 ntBASIC13.28□□□□□ -0.28
Tubgcp3P58854 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubgcp3P58854 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubgcp3P58854 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm16202-201ENSMUST00000117532 544 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm11978-201ENSMUST00000122315 466 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm9908-201ENSMUST00000211534 448 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.27□□□□□ -0.29
Tubgcp3P58854 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubgcp3P58854 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.26□□□□□ -0.29
Tubgcp3P58854 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms