Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tpm1P58771 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.5□□□□□ -0.09
Tpm1P58771 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tpm1P58771 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Gm15240-201ENSMUST00000118156 720 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.5□□□□□ -0.09
Tpm1P58771 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.5□□□□□ -0.09
Tpm1P58771 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm27430-201ENSMUST00000184585 107 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm27397-201ENSMUST00000184997 107 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm44333-201ENSMUST00000197168 107 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm44344-201ENSMUST00000200287 129 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Gm44771-201ENSMUST00000206975 626 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.5□□□□□ -0.09
Tpm1P58771 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tpm1P58771 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tpm1P58771 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.5□□□□□ -0.09
Tpm1P58771 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tpm1P58771 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.49□□□□□ -0.09
Tpm1P58771 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Gm25948-201ENSMUST00000175334 112 ntBASIC14.49□□□□□ -0.09
Tpm1P58771 AW822252-206ENSMUST00000208904 237 ntBASIC14.49□□□□□ -0.09
Tpm1P58771 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.49□□□□□ -0.09
Tpm1P58771 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.49□□□□□ -0.09
Tpm1P58771 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.49□□□□□ -0.09
Tpm1P58771 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Tpm1P58771 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tpm1P58771 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.48□□□□□ -0.09
Tpm1P58771 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.48□□□□□ -0.09
Tpm1P58771 Gm14767-201ENSMUST00000121559 586 ntBASIC14.48□□□□□ -0.09
Tpm1P58771 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Tpm1P58771 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.48□□□□□ -0.09
Tpm1P58771 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms