Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Gm27702-201ENSMUST00000184512 56 ntBASIC10.85□□□□□ -0.67
Cks2P56390 Gm29608-201ENSMUST00000190444 463 ntBASIC10.85□□□□□ -0.67
Cks2P56390 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.85□□□□□ -0.67
Cks2P56390 Gm43094-201ENSMUST00000196549 921 ntBASIC10.85□□□□□ -0.67
Cks2P56390 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Cks2P56390 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cks2P56390 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.85□□□□□ -0.67
Cks2P56390 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks2P56390 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.85□□□□□ -0.67
Cks2P56390 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.84□□□□□ -0.67
Cks2P56390 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.84□□□□□ -0.67
Cks2P56390 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Gm11524-201ENSMUST00000119349 807 ntBASIC10.84□□□□□ -0.67
Cks2P56390 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.84□□□□□ -0.67
Cks2P56390 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.84□□□□□ -0.67
Cks2P56390 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cks2P56390 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.84□□□□□ -0.67
Cks2P56390 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.84□□□□□ -0.67
Cks2P56390 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cks2P56390 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks2P56390 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cks2P56390 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.67
Cks2P56390 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.83□□□□□ -0.68
Cks2P56390 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.83□□□□□ -0.68
Cks2P56390 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Cks2P56390 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cks2P56390 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.83□□□□□ -0.68
Cks2P56390 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.83□□□□□ -0.68
Cks2P56390 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.83□□□□□ -0.68
Cks2P56390 Gm26464-201ENSMUST00000157094 305 ntBASIC10.83□□□□□ -0.68
Cks2P56390 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.83□□□□□ -0.68
Cks2P56390 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks2P56390 Gm9522-201ENSMUST00000182394 926 ntBASIC10.83□□□□□ -0.68
Cks2P56390 Gm5279-201ENSMUST00000199575 745 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms