Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.19□□□□□ -0.46
Sox2P48432 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox2P48432 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox2P48432 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Sox2P48432 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.18□□□□□ -0.46
Sox2P48432 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox2P48432 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Sox2P48432 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox2P48432 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox2P48432 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox2P48432 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox2P48432 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox2P48432 Gm12485-201ENSMUST00000119641 291 ntBASIC12.18□□□□□ -0.46
Sox2P48432 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.18□□□□□ -0.46
Sox2P48432 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox2P48432 Gm5161-201ENSMUST00000075243 853 ntBASIC12.18□□□□□ -0.46
Sox2P48432 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox2P48432 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.18□□□□□ -0.46
Sox2P48432 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox2P48432 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox2P48432 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox2P48432 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Sox2P48432 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox2P48432 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.17□□□□□ -0.46
Sox2P48432 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.17□□□□□ -0.46
Sox2P48432 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.17□□□□□ -0.46
Sox2P48432 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox2P48432 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox2P48432 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Gm27430-201ENSMUST00000184585 107 ntBASIC12.17□□□□□ -0.46
Sox2P48432 Gm17837-201ENSMUST00000186435 985 ntBASIC12.17□□□□□ -0.46
Sox2P48432 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Gm44333-201ENSMUST00000197168 107 ntBASIC12.17□□□□□ -0.46
Sox2P48432 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.17□□□□□ -0.46
Sox2P48432 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.17□□□□□ -0.46
Sox2P48432 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sox2P48432 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox2P48432 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sox2P48432 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Sox2P48432 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox2P48432 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox2P48432 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sox2P48432 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox2P48432 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Sox2P48432 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms