Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm23949-201ENSMUST00000104027 127 ntBASIC15.56■□□□□ 0.08
Nedd4P46935 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm15711-201ENSMUST00000118889 535 ntBASIC15.56■□□□□ 0.08
Nedd4P46935 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm23363-201ENSMUST00000175024 79 ntBASIC15.56■□□□□ 0.08
Nedd4P46935 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.56■□□□□ 0.08
Nedd4P46935 Gm43916-201ENSMUST00000205062 967 ntBASIC15.56■□□□□ 0.08
Nedd4P46935 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.56■□□□□ 0.08
Nedd4P46935 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Nedd4P46935 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nedd4P46935 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Nedd4P46935 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nedd4P46935 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Nedd4P46935 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.55■□□□□ 0.08
Nedd4P46935 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.55■□□□□ 0.08
Nedd4P46935 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.55■□□□□ 0.08
Nedd4P46935 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.55■□□□□ 0.08
Nedd4P46935 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Gm12795-201ENSMUST00000117594 539 ntBASIC15.55■□□□□ 0.08
Nedd4P46935 Gm15515-201ENSMUST00000117827 822 ntBASIC15.55■□□□□ 0.08
Nedd4P46935 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.55■□□□□ 0.08
Nedd4P46935 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.55■□□□□ 0.08
Nedd4P46935 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Gm25951-201ENSMUST00000175330 64 ntBASIC15.55■□□□□ 0.08
Nedd4P46935 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.55■□□□□ 0.08
Nedd4P46935 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nedd4P46935 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.55■□□□□ 0.08
Nedd4P46935 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.55■□□□□ 0.08
Nedd4P46935 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Nedd4P46935 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nedd4P46935 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.54■□□□□ 0.08
Nedd4P46935 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.54■□□□□ 0.08
Nedd4P46935 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nedd4P46935 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.54■□□□□ 0.08
Nedd4P46935 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 Gm27627-201ENSMUST00000183644 150 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.54■□□□□ 0.08
Nedd4P46935 Gm38210-201ENSMUST00000191944 809 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.54■□□□□ 0.08
Nedd4P46935 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.54■□□□□ 0.08
Nedd4P46935 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.54■□□□□ 0.08
Nedd4P46935 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms