Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HttP42859 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.42□□□□□ -0.26
HttP42859 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.42□□□□□ -0.26
HttP42859 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.42□□□□□ -0.26
HttP42859 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HttP42859 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HttP42859 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.42□□□□□ -0.26
HttP42859 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.42□□□□□ -0.26
HttP42859 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm8768-201ENSMUST00000220020 826 ntBASIC13.42□□□□□ -0.26
HttP42859 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HttP42859 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HttP42859 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HttP42859 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.41□□□□□ -0.26
HttP42859 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.41□□□□□ -0.26
HttP42859 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.41□□□□□ -0.26
HttP42859 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.41□□□□□ -0.26
HttP42859 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HttP42859 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.41□□□□□ -0.26
HttP42859 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.41□□□□□ -0.26
HttP42859 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HttP42859 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.41□□□□□ -0.26
HttP42859 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HttP42859 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
HttP42859 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HttP42859 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.41□□□□□ -0.26
HttP42859 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.41□□□□□ -0.26
HttP42859 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HttP42859 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.4□□□□□ -0.26
HttP42859 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
HttP42859 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.4□□□□□ -0.26
HttP42859 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.4□□□□□ -0.26
HttP42859 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.4□□□□□ -0.26
HttP42859 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.4□□□□□ -0.26
HttP42859 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Gm7719-201ENSMUST00000182374 975 ntBASIC13.4□□□□□ -0.26
HttP42859 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HttP42859 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.4□□□□□ -0.26
HttP42859 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HttP42859 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
HttP42859 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HttP42859 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms