Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm23085-201ENSMUST00000157849 293 ntBASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC18.49■□□□□ 0.55
Kdm5cP41230 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm8492-201ENSMUST00000182375 987 ntBASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC18.49■□□□□ 0.55
Kdm5cP41230 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm38355-201ENSMUST00000192514 1570 ntBASIC18.49■□□□□ 0.55
Kdm5cP41230 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.49■□□□□ 0.55
Kdm5cP41230 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Kdm5cP41230 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC18.48■□□□□ 0.55
Kdm5cP41230 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
Kdm5cP41230 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC18.48■□□□□ 0.55
Kdm5cP41230 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.48■□□□□ 0.55
Kdm5cP41230 Gm5455-201ENSMUST00000058710 715 ntBASIC18.48■□□□□ 0.55
Kdm5cP41230 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.48■□□□□ 0.55
Kdm5cP41230 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Kdm5cP41230 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Kdm5cP41230 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm8798-201ENSMUST00000211877 1661 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Mir7076-201ENSMUST00000183519 74 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm45398-201ENSMUST00000210561 165 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm11246-201ENSMUST00000120880 345 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 Mir1901-201ENSMUST00000122616 78 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm37246-201ENSMUST00000192665 835 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC18.47■□□□□ 0.55
Kdm5cP41230 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Kdm5cP41230 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gm9785-201ENSMUST00000062642 1006 ntBASIC18.47■□□□□ 0.55
Kdm5cP41230 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Kdm5cP41230 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Kdm5cP41230 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Kdm5cP41230 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Kdm5cP41230 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Gm11509-201ENSMUST00000117358 325 ntBASIC18.46■□□□□ 0.55
Kdm5cP41230 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Kdm5cP41230 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC18.46■□□□□ 0.55
Kdm5cP41230 Gm5733-201ENSMUST00000190232 939 ntBASIC18.46■□□□□ 0.55
Kdm5cP41230 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms