Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Upk2P38575 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Upk2P38575 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Upk2P38575 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Upk2P38575 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Upk2P38575 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.4□□□□□ -0.59
Upk2P38575 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.4□□□□□ -0.59
Upk2P38575 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Gm8805-201ENSMUST00000117848 313 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Gm13123-201ENSMUST00000122173 492 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Gm12138-201ENSMUST00000122180 951 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.39□□□□□ -0.59
Upk2P38575 Gm27892-201ENSMUST00000185017 106 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Gm37922-201ENSMUST00000195596 455 ntBASIC11.39□□□□□ -0.59
Upk2P38575 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Gm10012-201ENSMUST00000078252 192 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Upk2P38575 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.39□□□□□ -0.59
Upk2P38575 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Upk2P38575 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.38□□□□□ -0.59
Upk2P38575 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.38□□□□□ -0.59
Upk2P38575 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.38□□□□□ -0.59
Upk2P38575 Gm11803-201ENSMUST00000119966 444 ntBASIC11.38□□□□□ -0.59
Upk2P38575 Gm15806-201ENSMUST00000120696 955 ntBASIC11.38□□□□□ -0.59
Upk2P38575 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk2P38575 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.38□□□□□ -0.59
Upk2P38575 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms