Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxc5P32043 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxc5P32043 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxc5P32043 Gm28631-201ENSMUST00000190740 334 ntBASIC12.07□□□□□ -0.48
Hoxc5P32043 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxc5P32043 Gm18307-201ENSMUST00000206864 949 ntBASIC12.07□□□□□ -0.48
Hoxc5P32043 Gm19220-201ENSMUST00000222682 803 ntBASIC12.07□□□□□ -0.48
Hoxc5P32043 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hoxc5P32043 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxc5P32043 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxc5P32043 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxc5P32043 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.06□□□□□ -0.48
Hoxc5P32043 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxc5P32043 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc5P32043 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm12859-201ENSMUST00000117834 427 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Mir6977-201ENSMUST00000184960 64 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm10576-201ENSMUST00000191927 825 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm19931-201ENSMUST00000198920 368 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms