Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.56□□□□□ -0.08
Col2a1P28481 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col2a1P28481 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.56□□□□□ -0.08
Col2a1P28481 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col2a1P28481 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.56□□□□□ -0.08
Col2a1P28481 Gm26035-201ENSMUST00000083065 308 ntBASIC14.56□□□□□ -0.08
Col2a1P28481 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Col2a1P28481 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col2a1P28481 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col2a1P28481 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Gm9083-201ENSMUST00000120423 819 ntBASIC14.55□□□□□ -0.08
Col2a1P28481 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col2a1P28481 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Gm44958-201ENSMUST00000203734 736 ntBASIC14.55□□□□□ -0.08
Col2a1P28481 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.55□□□□□ -0.08
Col2a1P28481 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.55□□□□□ -0.08
Col2a1P28481 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col2a1P28481 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col2a1P28481 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col2a1P28481 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.54□□□□□ -0.08
Col2a1P28481 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col2a1P28481 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.54□□□□□ -0.08
Col2a1P28481 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Gm9230-201ENSMUST00000188228 532 ntBASIC14.54□□□□□ -0.08
Col2a1P28481 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.54□□□□□ -0.08
Col2a1P28481 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col2a1P28481 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col2a1P28481 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col2a1P28481 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Col2a1P28481 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.53□□□□□ -0.08
Col2a1P28481 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.53□□□□□ -0.08
Col2a1P28481 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm24934-201ENSMUST00000103764 111 ntBASIC14.53□□□□□ -0.08
Col2a1P28481 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col2a1P28481 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Col2a1P28481 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Gm5070-201ENSMUST00000177599 862 ntBASIC14.53□□□□□ -0.08
Col2a1P28481 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col2a1P28481 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms