Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccl6P27784 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccl6P27784 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.14□□□□□ -0.79
Ccl6P27784 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccl6P27784 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccl6P27784 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccl6P27784 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl6P27784 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccl6P27784 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.13□□□□□ -0.79
Ccl6P27784 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Gm12138-201ENSMUST00000122180 951 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccl6P27784 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Ccl6P27784 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Gm44397-201ENSMUST00000195950 113 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl6P27784 Gm18041-201ENSMUST00000218210 618 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.13□□□□□ -0.79
Ccl6P27784 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl6P27784 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl6P27784 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl6P27784 Gm12928-201ENSMUST00000117115 573 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Gm11918-201ENSMUST00000121660 179 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccl6P27784 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccl6P27784 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Gm28911-201ENSMUST00000188837 117 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccl6P27784 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Ccl6P27784 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccl6P27784 Gm45384-201ENSMUST00000210451 277 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Itm2b-204ENSMUST00000228637 783 ntBASIC10.12□□□□□ -0.79
Ccl6P27784 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Ccl6P27784 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl6P27784 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms