Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.03□□□□□ -0.48
Cd40lgP27548 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd40lgP27548 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40lgP27548 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40lgP27548 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40lgP27548 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.02□□□□□ -0.48
Cd40lgP27548 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cd40lgP27548 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40lgP27548 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40lgP27548 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.02□□□□□ -0.48
Cd40lgP27548 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cd40lgP27548 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm11814-201ENSMUST00000119515 929 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm12403-201ENSMUST00000121384 959 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm8463-201ENSMUST00000208573 613 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.02□□□□□ -0.49
Cd40lgP27548 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.02□□□□□ -0.49
Cd40lgP27548 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cd40lgP27548 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.01□□□□□ -0.49
Cd40lgP27548 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Grk6-205ENSMUST00000224653 2976 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Pck2-205ENSMUST00000226352 2784 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Mir874-201ENSMUST00000104769 76 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm5035-201ENSMUST00000215581 927 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms