Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1aP25118 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gm13689-201ENSMUST00000119360 685 ntBASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1aP25118 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1aP25118 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gm6447-201ENSMUST00000118905 835 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Mir6392-201ENSMUST00000184924 108 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gm44397-201ENSMUST00000195950 113 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gm6983-201ENSMUST00000214912 628 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Gm5186-201ENSMUST00000218781 920 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1aP25118 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms