Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
P20040 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
P20040 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.56□□□□□ -0.56
P20040 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.56□□□□□ -0.56
P20040 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
P20040 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.56□□□□□ -0.56
P20040 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.56□□□□□ -0.56
P20040 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.56□□□□□ -0.56
P20040 Gm26464-201ENSMUST00000157094 305 ntBASIC11.56□□□□□ -0.56
P20040 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.56□□□□□ -0.56
P20040 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.56□□□□□ -0.56
P20040 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.56□□□□□ -0.56
P20040 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.56□□□□□ -0.56
P20040 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.56□□□□□ -0.56
P20040 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.56□□□□□ -0.56
P20040 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.56□□□□□ -0.56
P20040 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
P20040 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
P20040 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
P20040 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.55□□□□□ -0.56
P20040 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
P20040 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
P20040 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.55□□□□□ -0.56
P20040 Gm27701-201ENSMUST00000184498 110 ntBASIC11.55□□□□□ -0.56
P20040 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.55□□□□□ -0.56
P20040 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.55□□□□□ -0.56
P20040 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.55□□□□□ -0.56
P20040 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.55□□□□□ -0.56
P20040 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.55□□□□□ -0.56
P20040 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
P20040 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P20040 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
P20040 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
P20040 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
P20040 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
P20040 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
P20040 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms