Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.56□□□□□ -0.4
Fv4P11370 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.56□□□□□ -0.4
Fv4P11370 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Fv4P11370 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Fv4P11370 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Fv4P11370 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Fv4P11370 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Fv4P11370 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.55□□□□□ -0.4
Fv4P11370 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Fv4P11370 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Fv4P11370 Gm6458-201ENSMUST00000211573 635 ntBASIC12.55□□□□□ -0.4
Fv4P11370 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Gm16372-201ENSMUST00000073088 450 ntBASIC12.55□□□□□ -0.4
Fv4P11370 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Fv4P11370 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Fv4P11370 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.55□□□□□ -0.4
Fv4P11370 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Fv4P11370 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Fv4P11370 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.54□□□□□ -0.4
Fv4P11370 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Gm7488-201ENSMUST00000117148 684 ntBASIC12.54□□□□□ -0.4
Fv4P11370 Gm12859-201ENSMUST00000117834 427 ntBASIC12.54□□□□□ -0.4
Fv4P11370 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
Fv4P11370 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Fv4P11370 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Fv4P11370 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fv4P11370 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fv4P11370 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fv4P11370 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms