Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccl3P10855 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccl3P10855 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl3P10855 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccl3P10855 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ccl3P10855 Mir874-201ENSMUST00000104769 76 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Gm12291-201ENSMUST00000121627 311 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Ccl3P10855 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Gm28450-201ENSMUST00000187349 638 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl3P10855 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccl3P10855 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl3P10855 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl3P10855 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccl3P10855 Gm8385-201ENSMUST00000058999 643 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl3P10855 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.44□□□□□ -0.58
Ccl3P10855 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.43□□□□□ -0.58
Ccl3P10855 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.43□□□□□ -0.58
Ccl3P10855 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccl3P10855 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccl3P10855 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm44651-201ENSMUST00000207343 372 ntBASIC11.43□□□□□ -0.58
Ccl3P10855 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccl3P10855 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccl3P10855 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccl3P10855 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.43□□□□□ -0.58
Ccl3P10855 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.43□□□□□ -0.58
Ccl3P10855 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccl3P10855 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl3P10855 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms