Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm14921-201ENSMUST00000118643 908 ntBASIC11.32□□□□□ -0.6
PtcraP0C6B2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.32□□□□□ -0.6
PtcraP0C6B2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm27847-201ENSMUST00000183711 107 ntBASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm27375-201ENSMUST00000183799 107 ntBASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.32□□□□□ -0.6
PtcraP0C6B2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm4271-201ENSMUST00000174444 973 ntBASIC11.31□□□□□ -0.6
PtcraP0C6B2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm7561-201ENSMUST00000211203 886 ntBASIC11.31□□□□□ -0.6
PtcraP0C6B2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.31□□□□□ -0.6
PtcraP0C6B2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PtcraP0C6B2 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.3□□□□□ -0.6
PtcraP0C6B2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PtcraP0C6B2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms