Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Gm43908-201ENSMUST00000205074 1472 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Gm44999-201ENSMUST00000207456 1493 ntBASIC13□□□□□ -0.33
Hoxb3P09026 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Gm7541-201ENSMUST00000118361 535 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hoxb3P09026 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Gm8365-201ENSMUST00000197334 648 ntBASIC13□□□□□ -0.33
Hoxb3P09026 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Il17rd-203ENSMUST00000225146 3366 ntBASIC13□□□□□ -0.33
Hoxb3P09026 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxb3P09026 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxb3P09026 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm15171-201ENSMUST00000122191 334 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxb3P09026 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm6222-202ENSMUST00000182143 629 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Mt1-202ENSMUST00000211807 1085 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Prl7a1-203ENSMUST00000224852 1283 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.99□□□□□ -0.33
Hoxb3P09026 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms