Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm12957-201ENSMUST00000117835 377 ntBASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm24548-201ENSMUST00000158650 108 ntBASIC12.79□□□□□ -0.36
Hoxa4P06798 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxa4P06798 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.79□□□□□ -0.36
Hoxa4P06798 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.79□□□□□ -0.36
Hoxa4P06798 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa4P06798 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa4P06798 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Gm6222-202ENSMUST00000182143 629 ntBASIC12.78□□□□□ -0.36
Hoxa4P06798 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.78□□□□□ -0.36
Hoxa4P06798 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxa4P06798 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hoxa4P06798 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa4P06798 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.77□□□□□ -0.36
Hoxa4P06798 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.77□□□□□ -0.36
Hoxa4P06798 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa4P06798 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hoxa4P06798 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa4P06798 Gm22018-201ENSMUST00000104357 131 ntBASIC12.77□□□□□ -0.37
Hoxa4P06798 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hoxa4P06798 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms