Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Tgfb1P04202 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tgfb1P04202 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tgfb1P04202 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm13612-201ENSMUST00000119276 390 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm12091-201ENSMUST00000146791 830 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.02□□□□□ -0.49
Tgfb1P04202 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tgfb1P04202 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tgfb1P04202 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Gm7287-201ENSMUST00000205267 602 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Gm44882-201ENSMUST00000205702 802 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.01□□□□□ -0.49
Tgfb1P04202 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.01□□□□□ -0.49
Tgfb1P04202 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tgfb1P04202 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tgfb1P04202 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Tgfb1P04202 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12□□□□□ -0.49
Tgfb1P04202 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tgfb1P04202 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tgfb1P04202 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Gm17435-202ENSMUST00000212699 1998 ntBASIC12□□□□□ -0.49
Tgfb1P04202 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tgfb1P04202 Gm12138-201ENSMUST00000122180 951 ntBASIC12□□□□□ -0.49
Tgfb1P04202 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms