Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ttc3O88196 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.53□□□□□ -0.24
Ttc3O88196 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ttc3O88196 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.53□□□□□ -0.24
Ttc3O88196 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ttc3O88196 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.53□□□□□ -0.24
Ttc3O88196 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.53□□□□□ -0.24
Ttc3O88196 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.53□□□□□ -0.24
Ttc3O88196 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ttc3O88196 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.53□□□□□ -0.24
Ttc3O88196 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.53□□□□□ -0.24
Ttc3O88196 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Ttc3O88196 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc3O88196 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Gm15276-201ENSMUST00000145953 498 ntBASIC13.52□□□□□ -0.24
Ttc3O88196 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ttc3O88196 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.52□□□□□ -0.24
Ttc3O88196 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.52□□□□□ -0.24
Ttc3O88196 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.52□□□□□ -0.24
Ttc3O88196 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.52□□□□□ -0.24
Ttc3O88196 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Ttc3O88196 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.52□□□□□ -0.24
Ttc3O88196 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc3O88196 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.52□□□□□ -0.25
Ttc3O88196 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.52□□□□□ -0.25
Ttc3O88196 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.52□□□□□ -0.25
Ttc3O88196 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.52□□□□□ -0.25
Ttc3O88196 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Gm44967-201ENSMUST00000207047 631 ntBASIC13.52□□□□□ -0.25
Ttc3O88196 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.52□□□□□ -0.25
Ttc3O88196 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc3O88196 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Ttc3O88196 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ttc3O88196 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.51□□□□□ -0.25
Ttc3O88196 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.51□□□□□ -0.25
Ttc3O88196 Gm13570-201ENSMUST00000140763 309 ntBASIC13.51□□□□□ -0.25
Ttc3O88196 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.51□□□□□ -0.25
Ttc3O88196 Gm45224-201ENSMUST00000208203 414 ntBASIC13.51□□□□□ -0.25
Ttc3O88196 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.51□□□□□ -0.25
Ttc3O88196 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc3O88196 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.51□□□□□ -0.25
Ttc3O88196 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms