Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim1O70400 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm13226-201ENSMUST00000117838 404 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm27682-201ENSMUST00000183930 110 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm40466-201ENSMUST00000212174 422 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.86□□□□□ -0.35
Pdlim1O70400 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm10268-201ENSMUST00000085340 555 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.86□□□□□ -0.35
Pdlim1O70400 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim1O70400 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim1O70400 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm1335-201ENSMUST00000121653 386 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm7029-201ENSMUST00000173226 450 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm27731-201ENSMUST00000185192 107 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Gm19163-201ENSMUST00000223313 780 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.85□□□□□ -0.35
Pdlim1O70400 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pdlim1O70400 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim1O70400 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms