Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cxcl13O55038 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.99□□□□□ -0.65
Cxcl13O55038 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl13O55038 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.98□□□□□ -0.65
Cxcl13O55038 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl13O55038 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl13O55038 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm13316-201ENSMUST00000140537 691 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm27243-201ENSMUST00000183964 521 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.97□□□□□ -0.65
Cxcl13O55038 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.97□□□□□ -0.65
Cxcl13O55038 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms