Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.81□□□□□ -0.52
Matn3O35701 Gm18057-201ENSMUST00000208220 503 ntBASIC11.81□□□□□ -0.52
Matn3O35701 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.81□□□□□ -0.52
Matn3O35701 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Matn3O35701 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Matn3O35701 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.81□□□□□ -0.52
Matn3O35701 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Matn3O35701 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Matn3O35701 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Matn3O35701 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Mir449b-201ENSMUST00000104833 80 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.8□□□□□ -0.52
Matn3O35701 Gm13385-201ENSMUST00000121089 220 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.8□□□□□ -0.52
Matn3O35701 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.8□□□□□ -0.52
Matn3O35701 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Gm25948-201ENSMUST00000175334 112 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Mir7023-201ENSMUST00000185093 64 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.8□□□□□ -0.52
Matn3O35701 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Matn3O35701 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Matn3O35701 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.8□□□□□ -0.52
Matn3O35701 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Matn3O35701 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Matn3O35701 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Matn3O35701 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.79□□□□□ -0.52
Matn3O35701 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.79□□□□□ -0.52
Matn3O35701 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Gm22065-201ENSMUST00000103753 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm22066-201ENSMUST00000103761 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24932-201ENSMUST00000103763 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24115-201ENSMUST00000103799 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm22190-201ENSMUST00000103827 110 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms