Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm12403-201ENSMUST00000121384 959 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.29□□□□□ -0.76
Efnb3O35393 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Gm44344-201ENSMUST00000200287 129 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Gm6888-201ENSMUST00000221983 706 ntBASIC10.29□□□□□ -0.76
Efnb3O35393 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Efnb3O35393 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.29□□□□□ -0.76
Efnb3O35393 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Efnb3O35393 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.29□□□□□ -0.76
Efnb3O35393 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Efnb3O35393 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.29□□□□□ -0.76
Efnb3O35393 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.29□□□□□ -0.76
Efnb3O35393 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Efnb3O35393 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.28□□□□□ -0.76
Efnb3O35393 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Efnb3O35393 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Efnb3O35393 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Gm3436-201ENSMUST00000179930 840 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Gm27306-201ENSMUST00000183970 107 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Mir7023-201ENSMUST00000185093 64 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Gm17837-201ENSMUST00000186435 985 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Efnb3O35393 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.28□□□□□ -0.76
Efnb3O35393 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Efnb3O35393 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.28□□□□□ -0.76
Efnb3O35393 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.28□□□□□ -0.76
Efnb3O35393 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Efnb3O35393 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms