Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.95□□□□□ -0.34
Gm3139J3QK78 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3139J3QK78 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Snord83b-201ENSMUST00000104546 94 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm23363-201ENSMUST00000175024 79 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm32025-201ENSMUST00000217960 307 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm18041-201ENSMUST00000218210 618 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.94□□□□□ -0.34
Gm3139J3QK78 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3139J3QK78 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.93□□□□□ -0.34
Gm3139J3QK78 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Gm43133-201ENSMUST00000197472 463 ntBASIC12.93□□□□□ -0.34
Gm3139J3QK78 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.93□□□□□ -0.34
Gm3139J3QK78 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.93□□□□□ -0.34
Gm3139J3QK78 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.93□□□□□ -0.34
Gm3139J3QK78 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm3139J3QK78 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3139J3QK78 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.92□□□□□ -0.34
Gm3139J3QK78 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3139J3QK78 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3139J3QK78 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3139J3QK78 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3139J3QK78 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm3139J3QK78 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms