Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NpcdF8VQB8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm13408-201ENSMUST00000119822 798 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm13935-201ENSMUST00000121859 798 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm44651-201ENSMUST00000207343 372 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Gm10752-201ENSMUST00000218348 729 ntBASIC15.62■□□□□ 0.09
NpcdF8VQB8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NpcdF8VQB8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Gm5904-201ENSMUST00000210286 865 ntBASIC15.61■□□□□ 0.09
NpcdF8VQB8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NpcdF8VQB8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.6■□□□□ 0.09
NpcdF8VQB8 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.6■□□□□ 0.09
NpcdF8VQB8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.6■□□□□ 0.09
NpcdF8VQB8 Gm8913-201ENSMUST00000209491 641 ntBASIC15.6■□□□□ 0.09
NpcdF8VQB8 Gm7848-201ENSMUST00000210739 718 ntBASIC15.6■□□□□ 0.09
NpcdF8VQB8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NpcdF8VQB8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NpcdF8VQB8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms