Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TprF6ZDS4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
TprF6ZDS4 Gm26185-201ENSMUST00000157692 266 ntBASIC11.97□□□□□ -0.49
TprF6ZDS4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.97□□□□□ -0.49
TprF6ZDS4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.97□□□□□ -0.49
TprF6ZDS4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
TprF6ZDS4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
TprF6ZDS4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TprF6ZDS4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TprF6ZDS4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.96□□□□□ -0.49
TprF6ZDS4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TprF6ZDS4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TprF6ZDS4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.96□□□□□ -0.5
TprF6ZDS4 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.96□□□□□ -0.5
TprF6ZDS4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
TprF6ZDS4 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.96□□□□□ -0.5
TprF6ZDS4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.96□□□□□ -0.5
TprF6ZDS4 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.96□□□□□ -0.5
TprF6ZDS4 Morn2-202ENSMUST00000227729 656 ntBASIC11.96□□□□□ -0.5
TprF6ZDS4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
TprF6ZDS4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.96□□□□□ -0.5
TprF6ZDS4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TprF6ZDS4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TprF6ZDS4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.95□□□□□ -0.5
TprF6ZDS4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.95□□□□□ -0.5
TprF6ZDS4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.95□□□□□ -0.5
TprF6ZDS4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.95□□□□□ -0.5
TprF6ZDS4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.95□□□□□ -0.5
TprF6ZDS4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.95□□□□□ -0.5
TprF6ZDS4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.95□□□□□ -0.5
TprF6ZDS4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TprF6ZDS4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TprF6ZDS4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TprF6ZDS4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms