Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Syt7-204ENSMUST00000223586 1344 ntBASIC11.03□□□□□ -0.64
BC035044E0CXF8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC035044E0CXF8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.02□□□□□ -0.64
BC035044E0CXF8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
BC035044E0CXF8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Gm14350-201ENSMUST00000116642 640 ntBASIC11.02□□□□□ -0.65
BC035044E0CXF8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Gm38223-201ENSMUST00000194484 695 ntBASIC11.02□□□□□ -0.65
BC035044E0CXF8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BC035044E0CXF8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Gm5354-201ENSMUST00000182417 973 ntBASIC11.01□□□□□ -0.65
BC035044E0CXF8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Mir7684-201ENSMUST00000183858 60 ntBASIC11.01□□□□□ -0.65
BC035044E0CXF8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.01□□□□□ -0.65
BC035044E0CXF8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.01□□□□□ -0.65
BC035044E0CXF8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BC035044E0CXF8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BC035044E0CXF8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms