Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gm8213-201ENSMUST00000118191 441 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gm24644-201ENSMUST00000157114 139 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gm24196-201ENSMUST00000179161 110 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gm29608-201ENSMUST00000190444 463 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 AY702102-202ENSMUST00000194651 1173 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.8□□□□□ -0.52
Gm3543D3Z235 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm3543D3Z235 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm43438-201ENSMUST00000198133 379 ntBASIC11.79□□□□□ -0.52
Gm3543D3Z235 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3543D3Z235 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.78□□□□□ -0.52
Gm3543D3Z235 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.78□□□□□ -0.52
Gm3543D3Z235 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Mir7085-201ENSMUST00000184353 66 ntBASIC11.78□□□□□ -0.52
Gm3543D3Z235 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms