Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmf1B9EKI3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmf1B9EKI3 Gm5385-201ENSMUST00000118988 1559 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm23363-201ENSMUST00000175024 79 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Mir3547-201ENSMUST00000175461 88 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm43118-201ENSMUST00000199149 775 ntBASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmf1B9EKI3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gm14921-201ENSMUST00000118643 908 ntBASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Mir339-201ENSMUST00000083659 96 ntBASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tmf1B9EKI3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Gm44851-201ENSMUST00000205735 2309 ntBASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Gm27243-201ENSMUST00000183964 521 ntBASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Tmf1B9EKI3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms