Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn7aB1AYL1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm23251-201ENSMUST00000103773 110 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm11667-201ENSMUST00000119828 486 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Gm9211-201ENSMUST00000182882 975 ntBASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn7aB1AYL1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm17931-201ENSMUST00000208132 634 ntBASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm18041-201ENSMUST00000218210 618 ntBASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Gm21811-201ENSMUST00000096485 930 ntBASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn7aB1AYL1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm22133-201ENSMUST00000102082 109 ntBASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm5419-201ENSMUST00000119301 527 ntBASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm17391-201ENSMUST00000171036 126 ntBASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.35■□□□□ 0.21
Scn7aB1AYL1 Gm44545-201ENSMUST00000208262 746 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms