Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm24231-201ENSMUST00000104315 133 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm12501-201ENSMUST00000119163 529 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm14665-201ENSMUST00000122294 557 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm4482-201ENSMUST00000200876 742 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col4a6B1AVK5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm25881-201ENSMUST00000157783 103 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm9022-201ENSMUST00000182482 992 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm28071-201ENSMUST00000190355 478 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Gm45550-201ENSMUST00000209380 946 ntBASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Col4a6B1AVK5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm11509-201ENSMUST00000117358 325 ntBASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Mir6958-201ENSMUST00000184207 73 ntBASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm18304-201ENSMUST00000189162 546 ntBASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col4a6B1AVK5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms