Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc112A0AUP1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gm12341-201ENSMUST00000119724 503 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gm16215-201ENSMUST00000161990 637 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gm6983-201ENSMUST00000214912 628 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc112A0AUP1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Gm6218-201ENSMUST00000219812 628 ntBASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc112A0AUP1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc112A0AUP1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc112A0AUP1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc112A0AUP1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm5687-201ENSMUST00000118252 640 ntBASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm44397-201ENSMUST00000195950 113 ntBASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm18307-201ENSMUST00000206864 949 ntBASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc112A0AUP1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms