Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Gm29396-201ENSMUST00000185659 716 ntBASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cfap99A0A140LIX9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm7029-201ENSMUST00000173226 450 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Cts7-204ENSMUST00000225321 1257 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap99A0A140LIX9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Mir877-201ENSMUST00000104738 85 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Mir874-201ENSMUST00000104769 76 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm26083-201ENSMUST00000157904 193 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm16570-201ENSMUST00000161951 436 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Gm45865-201ENSMUST00000211815 945 ntBASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap99A0A140LIX9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms