Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vstm4T1NXB5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vstm4T1NXB5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vstm4T1NXB5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.11□□□□□ -0.15
Vstm4T1NXB5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vstm4T1NXB5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm26308-201ENSMUST00000157768 69 ntBASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm27702-201ENSMUST00000184512 56 ntBASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.09□□□□□ -0.15
Vstm4T1NXB5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vstm4T1NXB5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vstm4T1NXB5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gm23935-201ENSMUST00000102303 57 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gm24270-201ENSMUST00000102326 57 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gm24245-201ENSMUST00000157318 57 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gm26315-201ENSMUST00000083890 321 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vstm4T1NXB5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms