Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Crlf1Q9JM58 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Daam2-202ENSMUST00000224595 1926 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm18893-201ENSMUST00000198416 943 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm17812-201ENSMUST00000204935 318 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gzmn-202ENSMUST00000225535 989 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Crlf1Q9JM58 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Crlf1Q9JM58 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms