Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1aQ9D132 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.34□□□□□ -0.43
Upk1aQ9D132 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.34□□□□□ -0.43
Upk1aQ9D132 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.34□□□□□ -0.43
Upk1aQ9D132 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.34□□□□□ -0.43
Upk1aQ9D132 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1aQ9D132 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1aQ9D132 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.33□□□□□ -0.44
Upk1aQ9D132 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Gm27306-201ENSMUST00000183970 107 ntBASIC12.33□□□□□ -0.44
Upk1aQ9D132 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.33□□□□□ -0.44
Upk1aQ9D132 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.33□□□□□ -0.44
Upk1aQ9D132 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk1aQ9D132 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1aQ9D132 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.32□□□□□ -0.44
Upk1aQ9D132 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Gm12485-201ENSMUST00000119641 291 ntBASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Gm15376-201ENSMUST00000122258 783 ntBASIC12.32□□□□□ -0.44
Upk1aQ9D132 Gm9522-201ENSMUST00000182394 926 ntBASIC12.32□□□□□ -0.44
Upk1aQ9D132 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.32□□□□□ -0.44
Upk1aQ9D132 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms