Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Mir686-201ENSMUST00000102174 109 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm13453-201ENSMUST00000118708 357 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm13813-201ENSMUST00000120998 787 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm15823-201ENSMUST00000064305 670 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm26315-201ENSMUST00000083890 321 ntBASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ssu72Q9CY97 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm5279-201ENSMUST00000199575 745 ntBASIC12.91□□□□□ -0.34
Ssu72Q9CY97 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm9063-201ENSMUST00000223299 582 ntBASIC12.91□□□□□ -0.34
Ssu72Q9CY97 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ssu72Q9CY97 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm24513-201ENSMUST00000174964 138 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm7063-201ENSMUST00000186840 981 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm38294-201ENSMUST00000192831 381 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.9□□□□□ -0.34
Ssu72Q9CY97 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.9□□□□□ -0.34
Ssu72Q9CY97 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms