Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.31■□□□□ 0.04
Smc3Q9CW03 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Mir7023-201ENSMUST00000185093 64 ntBASIC15.31■□□□□ 0.04
Smc3Q9CW03 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.31■□□□□ 0.04
Smc3Q9CW03 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smc3Q9CW03 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smc3Q9CW03 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm16215-201ENSMUST00000161990 637 ntBASIC15.3■□□□□ 0.04
Smc3Q9CW03 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.3■□□□□ 0.04
Smc3Q9CW03 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.3■□□□□ 0.04
Smc3Q9CW03 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smc3Q9CW03 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm15920-201ENSMUST00000118998 402 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Gm6218-201ENSMUST00000219812 628 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.29■□□□□ 0.04
Smc3Q9CW03 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.29■□□□□ 0.04
Smc3Q9CW03 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smc3Q9CW03 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms