Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim16Q99PP9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.75□□□□□ -0.37
Trim16Q99PP9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim16Q99PP9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 Gm9908-201ENSMUST00000211534 448 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.74□□□□□ -0.37
Trim16Q99PP9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim16Q99PP9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim16Q99PP9 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms