Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm44329-201ENSMUST00000197469 112 ntBASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Gm6867-201ENSMUST00000219165 425 ntBASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh15Q99PJ1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gm13600-201ENSMUST00000117949 744 ntBASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gm28686-201ENSMUST00000187404 609 ntBASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gm9797-202ENSMUST00000218003 294 ntBASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh15Q99PJ1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Mir874-201ENSMUST00000104769 76 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm15744-201ENSMUST00000161734 213 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm28324-201ENSMUST00000187913 264 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm18304-201ENSMUST00000189162 546 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh15Q99PJ1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Gm11956-201ENSMUST00000119525 512 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Gm25545-201ENSMUST00000122673 323 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Gm17889-201ENSMUST00000198410 598 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Gm3619-201ENSMUST00000219947 775 ntBASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh15Q99PJ1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh15Q99PJ1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh15Q99PJ1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pcdh15Q99PJ1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh15Q99PJ1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh15Q99PJ1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms