Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm8913-201ENSMUST00000209491 641 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Gm5950-201ENSMUST00000213337 772 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col25a1Q99MQ5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm25604-201ENSMUST00000158359 133 ntBASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm45433-201ENSMUST00000209386 247 ntBASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col25a1Q99MQ5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 Gm12363-201ENSMUST00000122250 668 ntBASIC13.47□□□□□ -0.25
Col25a1Q99MQ5 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms