Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm23984-201ENSMUST00000157139 203 ntBASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm5745-201ENSMUST00000183748 313 ntBASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp1b1Q99LU0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp1b1Q99LU0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Chmp1b1Q99LU0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp1b1Q99LU0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp1b1Q99LU0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Gm9794-201ENSMUST00000202370 423 ntBASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp1b1Q99LU0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp1b1Q99LU0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms