Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Gm13689-201ENSMUST00000119360 685 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.88□□□□□ -0.51
Lims1Q99JW4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lims1Q99JW4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm42612-201ENSMUST00000197986 623 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm43170-201ENSMUST00000199827 612 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm7730-201ENSMUST00000212486 454 ntBASIC11.87□□□□□ -0.51
Lims1Q99JW4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lims1Q99JW4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.86□□□□□ -0.51
Lims1Q99JW4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.86□□□□□ -0.51
Lims1Q99JW4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lims1Q99JW4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms