Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.13□□□□□ -0.31
Smarcd2Q99JR8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm8885-201ENSMUST00000189382 598 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm19208-201ENSMUST00000213861 912 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd2Q99JR8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm12291-201ENSMUST00000121627 311 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm25043-201ENSMUST00000158604 212 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm26361-201ENSMUST00000158868 186 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm44405-201ENSMUST00000198952 126 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd2Q99JR8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms