Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.05■□□□□ 0
Smc1bQ920F6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc1bQ920F6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smc1bQ920F6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Gm25668-201ENSMUST00000157700 129 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Gm17376-201ENSMUST00000166016 84 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.05■□□□□ -0
Smc1bQ920F6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.05■□□□□ -0
Smc1bQ920F6 Gm43138-201ENSMUST00000199123 708 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Gm6082-201ENSMUST00000215204 454 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Nsd1-205ENSMUST00000224693 852 ntBASIC15.05■□□□□ -0
Smc1bQ920F6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smc1bQ920F6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Smc1bQ920F6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smc1bQ920F6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Smc1bQ920F6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc1bQ920F6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smc1bQ920F6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.04■□□□□ -0
Smc1bQ920F6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.04■□□□□ -0
Smc1bQ920F6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.04■□□□□ -0
Smc1bQ920F6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.04■□□□□ -0
Smc1bQ920F6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.04■□□□□ -0
Smc1bQ920F6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.04■□□□□ -0
Smc1bQ920F6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc1bQ920F6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smc1bQ920F6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smc1bQ920F6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Smc1bQ920F6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.03■□□□□ -0
Smc1bQ920F6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.03■□□□□ -0
Smc1bQ920F6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm15370-201ENSMUST00000117158 253 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm20482-202ENSMUST00000174729 825 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.03■□□□□ -0
Smc1bQ920F6 Gm29741-201ENSMUST00000192667 421 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Gm6621-201ENSMUST00000193251 772 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.03■□□□□ -0
Smc1bQ920F6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms