Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdha3Q91Y16 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm6447-201ENSMUST00000118905 835 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm24644-201ENSMUST00000157114 139 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Proscos-202ENSMUST00000178990 666 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm18062-201ENSMUST00000208020 547 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm18055-201ENSMUST00000208254 547 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm8598-201ENSMUST00000221184 836 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha3Q91Y16 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Gm12390-201ENSMUST00000117897 397 ntBASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Gm14127-201ENSMUST00000117906 678 ntBASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Gm11803-201ENSMUST00000119966 444 ntBASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha3Q91Y16 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha3Q91Y16 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms